Ok, that's what I was getting at...the CMCON thing.
Post your code... I can guess all day...but quite frankly, I'm not going to.
And if you'll notice PortA.3 is a ST type input, whereas PortB.2 is a TTL input (I might have that backwards). So, it's possible that your voltage coming from the switch is marginal. It'll trip the one pin into the other state, but not the other pin.
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