Through the guidance of the guys here, I found that when using MPSAM to compile a PBP program you often get awarning about overwriting settings. The fix is to open up the INC file for the target PIC in the PBP directory and rem out the config line.

EG
Code:
;****************************************************************
;*  16F628A.INC                                                 *
;*                                                              *
;*  By        : Leonard Zerman, Jeff Schmoyer                   *
;*  Notice    : Copyright (c) 2003 microEngineering Labs, Inc.  *
;*              All Rights Reserved                             *
;*  Date      : 11/06/03                                        *
;*  Version   : 2.45                                            *
;*  Notes     :                                                 *
;****************************************************************
        NOLIST
    ifdef PM_USED
        LIST
        include 'M16F62xA.INC'  ; PM header
        device  pic16F628A, xt_osc, wdt_on, mclr_on, lvp_off, protect_off
        XALL
        NOLIST
    else
        LIST
        LIST p = 16F628A, r = dec, w = -302
        INCLUDE "P16F628A.INC"  ; MPASM  Header
        ; __config _XT_OSC & _WDT_ON & _MCLRE_ON & _LVP_OFF & _CP_OFF
        NOLIST
    endif
        LIST