Tons of different way
Scheme 1:
Use HPWM to produce your 0-5 volt
Use a op-amp and use the Vref signal to produce you 2nd 0-2.5 volt. If you can deal with the resolution.. it works.
Scheme2:
Use HPWM for your 0-5 volt
Create a timer based PWM to create the second PWM channel
Scheme3:
Use 2 DAC. MAX437 is simple and cheap
Scheme4:
Use Darrel Taylor Multi SSPWM. So you may produce few different voltage output.
Scheme5:
Create you own multi PWM output based on Timer interrupts.
Scheme6:
Use a PIC with 2 CCP module.. hence two PWM output. 16F876,16F877 and the list is long enough to fill the screen here 
Scheme7:
Use 2 PIC with 1 PWM. 1XPIC16F628 + PIC 12F683 talking together.
There's some others but it should be enough to start?
Steve
It's not a bug, it's a random feature.
There's no problem, only learning opportunities.
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